MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,771
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 1,841
Total number of protein coding genes annotated/found:
1,771
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000011.1
SEQF5026_00127
Genome Viewer
NA
AA
1743/581
25434-23692
PTS system lactose-specific EIICB component
SEQF5026|JADGKX010000011.1
SEQF5026_00128
Genome Viewer
NA
AA
357/119
25842-25486
PTS system lactose-specific EIIA component
SEQF5026|JADGKX010000011.1
SEQF5026_00129
Genome Viewer
NA
AA
639/213
26493-25855
Cryptic beta-glucoside bgl operon antiterminator
SEQF5026|JADGKX010000011.1
SEQF5026_00130
Genome Viewer
NA
AA
126/42
26694-26569
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00131
Genome Viewer
NA
AA
576/192
27554-26979
Galactose-6-phosphate isomerase subunit LacB
SEQF5026|JADGKX010000011.1
SEQF5026_00132
Genome Viewer
NA
AA
429/143
27996-27568
Galactose-6-phosphate isomerase subunit LacA
SEQF5026|JADGKX010000011.1
SEQF5026_00133
Genome Viewer
NA
AA
765/255
28776-28012
Lactose phosphotransferase system repressor
SEQF5026|JADGKX010000011.1
SEQF5026_00134
Genome Viewer
NA
AA
1335/445
29195-30529
Uracil permease
SEQF5026|JADGKX010000011.1
SEQF5026_00135
Genome Viewer
NA
AA
834/278
31471-30638
HTH-type transcriptional activator RhaS
SEQF5026|JADGKX010000011.1
SEQF5026_00136
Genome Viewer
NA
AA
807/269
31576-32382
Sugar phosphatase YidA
SEQF5026|JADGKX010000011.1
SEQF5026_00137
Genome Viewer
NA
AA
540/180
32962-32423
Inner membrane protein YagU
SEQF5026|JADGKX010000011.1
SEQF5026_00138
Genome Viewer
NA
AA
789/263
33069-33857
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
SEQF5026|JADGKX010000011.1
SEQF5026_00139
Genome Viewer
NA
AA
1086/362
34987-33902
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00140
Genome Viewer
NA
AA
603/201
35715-35113
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00141
Genome Viewer
NA
AA
327/109
36095-35769
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00142
Genome Viewer
NA
AA
387/129
36189-36575
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00143
Genome Viewer
NA
AA
564/188
37148-37711
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00144
Genome Viewer
NA
AA
1452/484
39232-37781
Multidrug resistance protein 3
SEQF5026|JADGKX010000011.1
SEQF5026_00145
Genome Viewer
NA
AA
1479/493
40817-39339
Multidrug resistance protein 3
SEQF5026|JADGKX010000011.1
SEQF5026_00146
Genome Viewer
NA
AA
753/251
41022-41774
Glycerol facilitator-aquaporin gla
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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